.. _topics-index:

===============
Welcome to MIIT
===============

This is the API documentation for MIIT, the multi-omics imaging integration toolset.

For examples and tutorials see: https://github.com/miit/examples


.. toctree::
  :caption: API
  :hidden:

  api


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Citing
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.. note::

    @article{wess2024spatial,
      title={Spatial Integration of Multi-Omics Data using the novel Multi-Omics Imaging Integration Toolset},
      author={Wess, Maximilian and Andersen, Maria K and Midtbust, Elise and Guillem, Juan Carlos Cabellos and Viset, Trond and St{\o}rkersen, {\O}ystein and Krossa, Sebastian and Rye, Morten Beck and Tessem, May-Britt},
      journal={bioRxiv},
      pages={2024--06},
      year={2024},
      publisher={Cold Spring Harbor Laboratory}
    }